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Cluster: CGMR011961_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_257551 k141_257551_1 169 1017 - 3.A.1.5.2
TC k141_257551 k141_257551_2 1014 2015 - 3.A.1.5.20
TC k141_257551 k141_257551_3 2017 3627 - 3.A.1.5.20
TF k141_257551 k141_257551_4 3649 4068 - 0042628
CAZyme k141_257551 k141_257551_5 4378 5553 - GH179
pfam k141_257551 k141_257551_6 5541 6509 - AP_endonuc_2
TC k141_257551 k141_257551_7 6533 7363 - 3.A.1.1.7
TC k141_257551 k141_257551_8 7360 8247 - 3.A.1.1.7
TC k141_257551 k141_257551_9 8298 9548 - 3.A.1.1.20
CAZyme k141_257551 k141_257551_10 9566 10558 - GH109
Gene ID: k141_257551_1
Type: TC
Location: 169 - 1017 (-)
Gene ID: k141_257551_2
Type: TC
Location: 1014 - 2015 (-)
Gene ID: k141_257551_3
Type: TC
Location: 2017 - 3627 (-)
Gene ID: k141_257551_4
Type: TF
Location: 3649 - 4068 (-)
Gene ID: k141_257551_5
Type: CAZyme
Location: 4378 - 5553 (-)
Gene ID: k141_257551_6
Type: pfam
Location: 5541 - 6509 (-)
Gene ID: k141_257551_7
Type: TC
Location: 6533 - 7363 (-)
Gene ID: k141_257551_8
Type: TC
Location: 7360 - 8247 (-)
Gene ID: k141_257551_9
Type: TC
Location: 8298 - 9548 (-)
Gene ID: k141_257551_10
Type: CAZyme
Location: 9566 - 10558 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Bacillales_A
→
Family
Planococcaceae
→
Genus
Sporosarcina
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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