Cluster: CGMR011961_CGC10
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011961
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_298414 | k141_298414_7 | 4085 | 4672 | - | 3.D.1.8.1 |
| TC | k141_298414 | k141_298414_8 | 4974 | 6206 | + | 2.A.1.2.34 |
| CAZyme | k141_298414 | k141_298414_9 | 6286 | 8139 | + | GT51 |
| pfam | k141_298414 | k141_298414_10 | 8482 | 9042 | - | DUF5366 |
| NULL(UNKNOWN) | k141_298414 | k141_298414_11 | 8987 | 9130 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_298414 | k141_298414_12 | 9178 | 10194 | + | 2.A.47.6.1 |
| TC | k141_298414 | k141_298414_13 | 10281 | 11474 | - | 2.A.51.1.6 |
| TF | k141_298414 | k141_298414_14 | 11477 | 11797 | - | PadR |
| TC | k141_298414 | k141_298414_15 | 12264 | 14681 | + | 2.A.63.1.2 |
| TC | k141_298414 | k141_298414_16 | 14678 | 15112 | + | 2.A.63.1.2 |
| TC | k141_298414 | k141_298414_17 | 15112 | 15450 | + | 2.A.63.1.2 |
| TC | k141_298414 | k141_298414_18 | 15443 | 16927 | + | 2.A.63.1.2 |
| TC | k141_298414 | k141_298414_19 | 16933 | 17409 | + | 2.A.63.1.2 |
| TC | k141_298414 | k141_298414_20 | 17409 | 17684 | + | 2.A.63.1.2 |
Gene ID: k141_298414_7
Type: TC
Location: 4085 - 4672 (-)
Type: TC
Location: 4085 - 4672 (-)
Gene ID: k141_298414_8
Type: TC
Location: 4974 - 6206 (+)
Type: TC
Location: 4974 - 6206 (+)
Gene ID: k141_298414_9
Type: CAZyme
Location: 6286 - 8139 (+)
Type: CAZyme
Location: 6286 - 8139 (+)
Gene ID: k141_298414_10
Type: pfam
Location: 8482 - 9042 (-)
Type: pfam
Location: 8482 - 9042 (-)
Gene ID: k141_298414_11
Type:
Location: 8987 - 9130 (-)
Type:
Location: 8987 - 9130 (-)
Gene ID: k141_298414_12
Type: TC
Location: 9178 - 10194 (+)
Type: TC
Location: 9178 - 10194 (+)
Gene ID: k141_298414_13
Type: TC
Location: 10281 - 11474 (-)
Type: TC
Location: 10281 - 11474 (-)
Gene ID: k141_298414_14
Type: TF
Location: 11477 - 11797 (-)
Type: TF
Location: 11477 - 11797 (-)
Gene ID: k141_298414_15
Type: TC
Location: 12264 - 14681 (+)
Type: TC
Location: 12264 - 14681 (+)
Gene ID: k141_298414_16
Type: TC
Location: 14678 - 15112 (+)
Type: TC
Location: 14678 - 15112 (+)
Gene ID: k141_298414_17
Type: TC
Location: 15112 - 15450 (+)
Type: TC
Location: 15112 - 15450 (+)
Gene ID: k141_298414_18
Type: TC
Location: 15443 - 16927 (+)
Type: TC
Location: 15443 - 16927 (+)
Gene ID: k141_298414_19
Type: TC
Location: 16933 - 17409 (+)
Type: TC
Location: 16933 - 17409 (+)
Gene ID: k141_298414_20
Type: TC
Location: 17409 - 17684 (+)
Type: TC
Location: 17409 - 17684 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Bacillales_A
Family
Planococcaceae
Genus
Sporosarcina
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.