Cluster: CGMR011794_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR011794
- CGC Family ID: CGCFAM_01104
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_112698 | k141_112698_61 | 71270 | 73885 | + | 3.A.9.1.2 |
| pfam | k141_112698 | k141_112698_62 | 73927 | 74751 | - | Lipase_GDSL_2 |
| sulfatase | k141_112698 | k141_112698_63 | 74778 | 75515 | - | S1_2 |
| TC | k141_112698 | k141_112698_64 | 75897 | 78608 | + | 3.A.3.2.21 |
| CAZyme | k141_112698 | k141_112698_65 | 78947 | 79762 | + | GT2 |
| pfam | k141_112698 | k141_112698_66 | 79771 | 80922 | + | Glyphos_transf |
| pfam | k141_112698 | k141_112698_67 | 80949 | 81350 | + | CTP_transf_like |
| CAZyme | k141_112698 | k141_112698_68 | 81347 | 82447 | + | GT4 |
| pfam | k141_112698 | k141_112698_69 | 82448 | 83956 | + | Wzy_C |
| pfam | k141_112698 | k141_112698_70 | 84150 | 84977 | + | LicD |
| TC | k141_112698 | k141_112698_71 | 84970 | 86430 | + | 2.A.66.2.22 |
| TC | k141_112698 | k141_112698_72 | 86463 | 86792 | - | 2.A.78.1.1 |
| TC | k141_112698 | k141_112698_73 | 86789 | 87487 | - | 2.A.78.1.1 |
Gene ID: k141_112698_61
Type: TC
Location: 71270 - 73885 (+)
Type: TC
Location: 71270 - 73885 (+)
Gene ID: k141_112698_62
Type: pfam
Location: 73927 - 74751 (-)
Type: pfam
Location: 73927 - 74751 (-)
Gene ID: k141_112698_63
Type: sulfatase
Location: 74778 - 75515 (-)
Type: sulfatase
Location: 74778 - 75515 (-)
Gene ID: k141_112698_64
Type: TC
Location: 75897 - 78608 (+)
Type: TC
Location: 75897 - 78608 (+)
Gene ID: k141_112698_65
Type: CAZyme
Location: 78947 - 79762 (+)
Type: CAZyme
Location: 78947 - 79762 (+)
Gene ID: k141_112698_66
Type: pfam
Location: 79771 - 80922 (+)
Type: pfam
Location: 79771 - 80922 (+)
Gene ID: k141_112698_67
Type: pfam
Location: 80949 - 81350 (+)
Type: pfam
Location: 80949 - 81350 (+)
Gene ID: k141_112698_68
Type: CAZyme
Location: 81347 - 82447 (+)
Type: CAZyme
Location: 81347 - 82447 (+)
Gene ID: k141_112698_69
Type: pfam
Location: 82448 - 83956 (+)
Type: pfam
Location: 82448 - 83956 (+)
Gene ID: k141_112698_70
Type: pfam
Location: 84150 - 84977 (+)
Type: pfam
Location: 84150 - 84977 (+)
Gene ID: k141_112698_71
Type: TC
Location: 84970 - 86430 (+)
Type: TC
Location: 84970 - 86430 (+)
Gene ID: k141_112698_72
Type: TC
Location: 86463 - 86792 (-)
Type: TC
Location: 86463 - 86792 (-)
Gene ID: k141_112698_73
Type: TC
Location: 86789 - 87487 (-)
Type: TC
Location: 86789 - 87487 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fumia
Species
Fumia xinanensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.