Cluster: CGMR011794_CGC21
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: CGMR011794
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_84489 | k141_84489_18 | 20439 | 22286 | - | GH13_39 |
| CAZyme | k141_84489 | k141_84489_19 | 22604 | 24829 | + | GH13_9 |
| pfam | k141_84489 | k141_84489_20 | 24894 | 26102 | + | NTP_transferase | Hexapep_GlmU |
| pfam | k141_84489 | k141_84489_21 | 26139 | 27257 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_84489 | k141_84489_22 | 27361 | 28782 | + | GT5 |
| CAZyme | k141_84489 | k141_84489_23 | 28927 | 31413 | + | GT35 |
| TC | k141_84489 | k141_84489_24 | 31637 | 33910 | + | 3.A.1.135.5 |
| pfam | k141_84489 | k141_84489_25 | 33965 | 34450 | + | DUF1854 |
| TC | k141_84489 | k141_84489_26 | 34487 | 36673 | + | 3.A.1.106.2 |
| TC | k141_84489 | k141_84489_27 | 36941 | 37786 | + | 3.A.1.3.27 |
| TC | k141_84489 | k141_84489_28 | 37930 | 38631 | + | 3.A.1.3.15 |
| TC | k141_84489 | k141_84489_29 | 38618 | 39352 | + | 3.A.1.3.15 |
Gene ID: k141_84489_18
Type: CAZyme
Location: 20439 - 22286 (-)
Type: CAZyme
Location: 20439 - 22286 (-)
Gene ID: k141_84489_19
Type: CAZyme
Location: 22604 - 24829 (+)
Type: CAZyme
Location: 22604 - 24829 (+)
Gene ID: k141_84489_20
Type: pfam
Location: 24894 - 26102 (+)
Type: pfam
Location: 24894 - 26102 (+)
Gene ID: k141_84489_21
Type: pfam
Location: 26139 - 27257 (+)
Type: pfam
Location: 26139 - 27257 (+)
Gene ID: k141_84489_22
Type: CAZyme
Location: 27361 - 28782 (+)
Type: CAZyme
Location: 27361 - 28782 (+)
Gene ID: k141_84489_23
Type: CAZyme
Location: 28927 - 31413 (+)
Type: CAZyme
Location: 28927 - 31413 (+)
Gene ID: k141_84489_24
Type: TC
Location: 31637 - 33910 (+)
Type: TC
Location: 31637 - 33910 (+)
Gene ID: k141_84489_25
Type: pfam
Location: 33965 - 34450 (+)
Type: pfam
Location: 33965 - 34450 (+)
Gene ID: k141_84489_26
Type: TC
Location: 34487 - 36673 (+)
Type: TC
Location: 34487 - 36673 (+)
Gene ID: k141_84489_27
Type: TC
Location: 36941 - 37786 (+)
Type: TC
Location: 36941 - 37786 (+)
Gene ID: k141_84489_28
Type: TC
Location: 37930 - 38631 (+)
Type: TC
Location: 37930 - 38631 (+)
Gene ID: k141_84489_29
Type: TC
Location: 38618 - 39352 (+)
Type: TC
Location: 38618 - 39352 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fumia
Species
Fumia xinanensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.