dbCAN Logo

Cluster: CGMR011794_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180803 k141_180803_38 54376 55173 + 2.A.102.4.4
NULL(UNKNOWN) k141_180803 k141_180803_39 55226 55468 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_180803 k141_180803_40 55648 56748 + GH32
TF k141_180803 k141_180803_41 56758 57006 - HTH_3
TC k141_180803 k141_180803_42 57321 59093 - 3.A.1.106.3
TC k141_180803 k141_180803_43 59080 60837 - 3.A.1.106.3
pfam k141_180803 k141_180803_44 61599 67874 + F5_F8_type_C | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Ig_3 | DUF4855 | Choline_bind_2 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3
CAZyme k141_180803 k141_180803_45 68422 70287 + GH129
Gene ID: k141_180803_38
Type: TC
Location: 54376 - 55173 (+)
Gene ID: k141_180803_39
Type:
Location: 55226 - 55468 (-)
Gene ID: k141_180803_40
Type: CAZyme
Location: 55648 - 56748 (+)
Gene ID: k141_180803_41
Type: TF
Location: 56758 - 57006 (-)
Gene ID: k141_180803_42
Type: TC
Location: 57321 - 59093 (-)
Gene ID: k141_180803_43
Type: TC
Location: 59080 - 60837 (-)
Gene ID: k141_180803_44
Type: pfam
Location: 61599 - 67874 (+)
Gene ID: k141_180803_45
Type: CAZyme
Location: 68422 - 70287 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Fumia
→
Species
Fumia xinanensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List