Cluster: CGMR011794_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011794
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_91254 | k141_91254_38 | 46467 | 47801 | - | 1.A.26.1.2 |
| pfam | k141_91254 | k141_91254_39 | 48229 | 49923 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3 |
| TF | k141_91254 | k141_91254_40 | 50015 | 51553 | - | HTH_AraC |
| TC | k141_91254 | k141_91254_41 | 51519 | 53324 | - | 8.A.59.2.1 |
| CAZyme | k141_91254 | k141_91254_42 | 53414 | 54505 | - | GH177 |
Gene ID: k141_91254_38
Type: TC
Location: 46467 - 47801 (-)
Type: TC
Location: 46467 - 47801 (-)
Gene ID: k141_91254_39
Type: pfam
Location: 48229 - 49923 (+)
Type: pfam
Location: 48229 - 49923 (+)
Gene ID: k141_91254_40
Type: TF
Location: 50015 - 51553 (-)
Type: TF
Location: 50015 - 51553 (-)
Gene ID: k141_91254_41
Type: TC
Location: 51519 - 53324 (-)
Type: TC
Location: 51519 - 53324 (-)
Gene ID: k141_91254_42
Type: CAZyme
Location: 53414 - 54505 (-)
Type: CAZyme
Location: 53414 - 54505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fumia
Species
Fumia xinanensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.