Cluster: CGMR011584_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR011584
- CGC Family ID: CGCFAM_00255
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_66805 | k141_66805_3 | 1705 | 2730 | - | GT4 |
| CAZyme | k141_66805 | k141_66805_4 | 2734 | 3951 | - | GT4 |
| TC | k141_66805 | k141_66805_5 | 4109 | 5839 | - | 8.A.7.1.1 |
| STP | k141_66805 | k141_66805_6 | 5839 | 6105 | - | PTS-HPr |
| NULL(UNKNOWN) | k141_66805 | k141_66805_7 | 6222 | 6407 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_66805 | k141_66805_8 | 6642 | 8837 | + | 3.A.9.1.2 |
Gene ID: k141_66805_3
Type: CAZyme
Location: 1705 - 2730 (-)
Type: CAZyme
Location: 1705 - 2730 (-)
Gene ID: k141_66805_4
Type: CAZyme
Location: 2734 - 3951 (-)
Type: CAZyme
Location: 2734 - 3951 (-)
Gene ID: k141_66805_5
Type: TC
Location: 4109 - 5839 (-)
Type: TC
Location: 4109 - 5839 (-)
Gene ID: k141_66805_6
Type: STP
Location: 5839 - 6105 (-)
Type: STP
Location: 5839 - 6105 (-)
Gene ID: k141_66805_7
Type:
Location: 6222 - 6407 (-)
Type:
Location: 6222 - 6407 (-)
Gene ID: k141_66805_8
Type: TC
Location: 6642 - 8837 (+)
Type: TC
Location: 6642 - 8837 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus portuensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.