Cluster: CGMR011584_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011584
- CGC Family ID: CGCFAM_08236
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_99098 | k141_99098_89 | 89021 | 90214 | - | 2.A.1.46.5 |
| peptidase | k141_99098 | k141_99098_90 | 90567 | 91880 | - | C01.UPB |
| pfam | k141_99098 | k141_99098_91 | 92041 | 92721 | + | Epimerase | F420_oxidored | NAD_binding_10 |
| CAZyme | k141_99098 | k141_99098_92 | 92970 | 94724 | + | GH2 |
| TC | k141_99098 | k141_99098_93 | 94734 | 96089 | + | 2.A.2.3.2 |
Gene ID: k141_99098_89
Type: TC
Location: 89021 - 90214 (-)
Type: TC
Location: 89021 - 90214 (-)
Gene ID: k141_99098_90
Type: peptidase
Location: 90567 - 91880 (-)
Type: peptidase
Location: 90567 - 91880 (-)
Gene ID: k141_99098_91
Type: pfam
Location: 92041 - 92721 (+)
Type: pfam
Location: 92041 - 92721 (+)
Gene ID: k141_99098_92
Type: CAZyme
Location: 92970 - 94724 (+)
Type: CAZyme
Location: 92970 - 94724 (+)
Gene ID: k141_99098_93
Type: TC
Location: 94734 - 96089 (+)
Type: TC
Location: 94734 - 96089 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Species
Limosilactobacillus portuensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.