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Cluster: CGMR011562_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_303366 k141_303366_39 41624 43669 + 1.B.14.1.4
STP k141_303366 k141_303366_40 43816 44889 + Peripla_BP_2
TC k141_303366 k141_303366_41 44939 45997 + 3.A.1.14.5
TC k141_303366 k141_303366_42 46076 46828 + 3.A.1.14.1
pfam k141_303366 k141_303366_43 46912 47775 + TrmO_N | FmdE
CAZyme k141_303366 k141_303366_44 48749 49522 + GH16_3
TC k141_303366 k141_303366_45 50105 51646 + 3.B.1.1.5
sulfatase k141_303366 k141_303366_46 51669 53153 + S1_37
TC k141_303366 k141_303366_47 53164 53685 + 3.B.1.1.2
Gene ID: k141_303366_39
Type: TC
Location: 41624 - 43669 (+)
Gene ID: k141_303366_40
Type: STP
Location: 43816 - 44889 (+)
Gene ID: k141_303366_41
Type: TC
Location: 44939 - 45997 (+)
Gene ID: k141_303366_42
Type: TC
Location: 46076 - 46828 (+)
Gene ID: k141_303366_43
Type: pfam
Location: 46912 - 47775 (+)
Gene ID: k141_303366_44
Type: CAZyme
Location: 48749 - 49522 (+)
Gene ID: k141_303366_45
Type: TC
Location: 50105 - 51646 (+)
Gene ID: k141_303366_46
Type: sulfatase
Location: 51669 - 53153 (+)
Gene ID: k141_303366_47
Type: TC
Location: 53164 - 53685 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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