Cluster: CGMR011562_CGC15
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR011562
- CGC Family ID: CGCFAM_02922
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1170 | k141_1170_46 | 69272 | 70858 | - | CBM32 |
| CAZyme | k141_1170 | k141_1170_47 | 70878 | 73673 | - | CBM32 |
| NULL(UNKNOWN) | k141_1170 | k141_1170_48 | 73710 | 75065 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_1170 | k141_1170_49 | 75093 | 76682 | - | SusD_RagB |
| TC | k141_1170 | k141_1170_50 | 76702 | 79821 | - | 1.B.14.6.1 |
| pfam | k141_1170 | k141_1170_51 | 79833 | 81383 | - | Fasciclin |
| pfam | k141_1170 | k141_1170_52 | 81390 | 83015 | - | Fasciclin |
| TC | k141_1170 | k141_1170_53 | 83028 | 84566 | - | 8.A.46.1.4 |
| TC | k141_1170 | k141_1170_54 | 84580 | 87825 | - | 1.B.14.6.1 |
| pfam | k141_1170 | k141_1170_55 | 87847 | 90114 | - | Fasciclin | Fasciclin |
| CAZyme | k141_1170 | k141_1170_56 | 91145 | 93019 | - | GH33 |
| pfam | k141_1170 | k141_1170_57 | 93042 | 94568 | - | SusD_RagB | SusD-like_3 |
| TC | k141_1170 | k141_1170_58 | 94585 | 97404 | - | 1.B.14.6.1 |
| pfam | k141_1170 | k141_1170_59 | 97437 | 98909 | - | Fasciclin |
| pfam | k141_1170 | k141_1170_60 | 98912 | 100423 | - | SusD_RagB | SusD-like_3 |
| TC | k141_1170 | k141_1170_61 | 100439 | 103690 | - | 1.B.14.6.1 |
| pfam | k141_1170 | k141_1170_62 | 103707 | 105677 | - | Fasciclin |
| CAZyme | k141_1170 | k141_1170_63 | 105693 | 106802 | - | CBM32 |
Gene ID: k141_1170_46
Type: CAZyme
Location: 69272 - 70858 (-)
Type: CAZyme
Location: 69272 - 70858 (-)
Gene ID: k141_1170_47
Type: CAZyme
Location: 70878 - 73673 (-)
Type: CAZyme
Location: 70878 - 73673 (-)
Gene ID: k141_1170_48
Type:
Location: 73710 - 75065 (-)
Type:
Location: 73710 - 75065 (-)
Gene ID: k141_1170_49
Type: pfam
Location: 75093 - 76682 (-)
Type: pfam
Location: 75093 - 76682 (-)
Gene ID: k141_1170_50
Type: TC
Location: 76702 - 79821 (-)
Type: TC
Location: 76702 - 79821 (-)
Gene ID: k141_1170_51
Type: pfam
Location: 79833 - 81383 (-)
Type: pfam
Location: 79833 - 81383 (-)
Gene ID: k141_1170_52
Type: pfam
Location: 81390 - 83015 (-)
Type: pfam
Location: 81390 - 83015 (-)
Gene ID: k141_1170_53
Type: TC
Location: 83028 - 84566 (-)
Type: TC
Location: 83028 - 84566 (-)
Gene ID: k141_1170_54
Type: TC
Location: 84580 - 87825 (-)
Type: TC
Location: 84580 - 87825 (-)
Gene ID: k141_1170_55
Type: pfam
Location: 87847 - 90114 (-)
Type: pfam
Location: 87847 - 90114 (-)
Gene ID: k141_1170_56
Type: CAZyme
Location: 91145 - 93019 (-)
Type: CAZyme
Location: 91145 - 93019 (-)
Gene ID: k141_1170_57
Type: pfam
Location: 93042 - 94568 (-)
Type: pfam
Location: 93042 - 94568 (-)
Gene ID: k141_1170_58
Type: TC
Location: 94585 - 97404 (-)
Type: TC
Location: 94585 - 97404 (-)
Gene ID: k141_1170_59
Type: pfam
Location: 97437 - 98909 (-)
Type: pfam
Location: 97437 - 98909 (-)
Gene ID: k141_1170_60
Type: pfam
Location: 98912 - 100423 (-)
Type: pfam
Location: 98912 - 100423 (-)
Gene ID: k141_1170_61
Type: TC
Location: 100439 - 103690 (-)
Type: TC
Location: 100439 - 103690 (-)
Gene ID: k141_1170_62
Type: pfam
Location: 103707 - 105677 (-)
Type: pfam
Location: 103707 - 105677 (-)
Gene ID: k141_1170_63
Type: CAZyme
Location: 105693 - 106802 (-)
Type: CAZyme
Location: 105693 - 106802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Species
Odoribacter sp900541415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.