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Cluster: CGMR011562_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_59306 k141_59306_4 4207 4959 - 9.B.115.1.6
STP k141_59306 k141_59306_5 5016 6068 - HATPase_c | HisKA
TF k141_59306 k141_59306_6 6065 6739 - Trans_reg_C
TC k141_59306 k141_59306_7 6736 7245 - 2.A.7.2.1
pfam k141_59306 k141_59306_8 7437 7598 + Rubredoxin
pfam k141_59306 k141_59306_9 7930 8943 + PBP_like_2
TC k141_59306 k141_59306_10 8940 9869 + 3.A.1.7.1
TC k141_59306 k141_59306_11 9888 10733 + 3.A.1.7.1
TC k141_59306 k141_59306_12 10733 11611 + 3.A.1.7.5
pfam k141_59306 k141_59306_13 11793 12509 + PAPS_reduct
CAZyme k141_59306 k141_59306_14 12693 13526 - CE1
pfam k141_59306 k141_59306_15 13563 13853 - Vsr
pfam k141_59306 k141_59306_16 13893 14681 + Metallophos
CAZyme k141_59306 k141_59306_17 14693 15841 + GT1
Gene ID: k141_59306_4
Type: TC
Location: 4207 - 4959 (-)
Gene ID: k141_59306_5
Type: STP
Location: 5016 - 6068 (-)
Gene ID: k141_59306_6
Type: TF
Location: 6065 - 6739 (-)
Gene ID: k141_59306_7
Type: TC
Location: 6736 - 7245 (-)
Gene ID: k141_59306_8
Type: pfam
Location: 7437 - 7598 (+)
Gene ID: k141_59306_9
Type: pfam
Location: 7930 - 8943 (+)
Gene ID: k141_59306_10
Type: TC
Location: 8940 - 9869 (+)
Gene ID: k141_59306_11
Type: TC
Location: 9888 - 10733 (+)
Gene ID: k141_59306_12
Type: TC
Location: 10733 - 11611 (+)
Gene ID: k141_59306_13
Type: pfam
Location: 11793 - 12509 (+)
Gene ID: k141_59306_14
Type: CAZyme
Location: 12693 - 13526 (-)
Gene ID: k141_59306_15
Type: pfam
Location: 13563 - 13853 (-)
Gene ID: k141_59306_16
Type: pfam
Location: 13893 - 14681 (+)
Gene ID: k141_59306_17
Type: CAZyme
Location: 14693 - 15841 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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