Cluster: CGMR011407_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011407
- CGC Family ID: CGCFAM_02766
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4249 | k141_4249_23 | 22549 | 23538 | - | 8.A.5.1.4 |
| CAZyme | k141_4249 | k141_4249_24 | 23590 | 25377 | - | GH15 |
| pfam | k141_4249 | k141_4249_25 | 25374 | 26180 | - | Trehalose_PPase |
| pfam | k141_4249 | k141_4249_26 | 26451 | 27029 | + | SNase |
| TC | k141_4249 | k141_4249_27 | 27132 | 28304 | - | 2.A.1.2.14 |
Gene ID: k141_4249_23
Type: TC
Location: 22549 - 23538 (-)
Type: TC
Location: 22549 - 23538 (-)
Gene ID: k141_4249_24
Type: CAZyme
Location: 23590 - 25377 (-)
Type: CAZyme
Location: 23590 - 25377 (-)
Gene ID: k141_4249_25
Type: pfam
Location: 25374 - 26180 (-)
Type: pfam
Location: 25374 - 26180 (-)
Gene ID: k141_4249_26
Type: pfam
Location: 26451 - 27029 (+)
Type: pfam
Location: 26451 - 27029 (+)
Gene ID: k141_4249_27
Type: TC
Location: 27132 - 28304 (-)
Type: TC
Location: 27132 - 28304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.