Cluster: CGMR011407_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011407
- CGC Family ID: CGCFAM_04864
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_121935 | k141_121935_13 | 7879 | 9378 | + | GH77 |
| pfam | k141_121935 | k141_121935_14 | 9451 | 10482 | + | Queuosine_synth |
| pfam | k141_121935 | k141_121935_15 | 10497 | 11627 | + | TGT |
| TC | k141_121935 | k141_121935_16 | 11777 | 12103 | + | 3.A.5.1.1 |
| TC | k141_121935 | k141_121935_17 | 12167 | 14041 | + | 2.A.6.4.1 |
| TC | k141_121935 | k141_121935_18 | 14069 | 15010 | + | 2.A.6.4.1 |
Gene ID: k141_121935_13
Type: CAZyme
Location: 7879 - 9378 (+)
Type: CAZyme
Location: 7879 - 9378 (+)
Gene ID: k141_121935_14
Type: pfam
Location: 9451 - 10482 (+)
Type: pfam
Location: 9451 - 10482 (+)
Gene ID: k141_121935_15
Type: pfam
Location: 10497 - 11627 (+)
Type: pfam
Location: 10497 - 11627 (+)
Gene ID: k141_121935_16
Type: TC
Location: 11777 - 12103 (+)
Type: TC
Location: 11777 - 12103 (+)
Gene ID: k141_121935_17
Type: TC
Location: 12167 - 14041 (+)
Type: TC
Location: 12167 - 14041 (+)
Gene ID: k141_121935_18
Type: TC
Location: 14069 - 15010 (+)
Type: TC
Location: 14069 - 15010 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.