Cluster: CGMR011407_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011407
- CGC Family ID: CGCFAM_03723
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_224723 | k141_224723_3 | 1013 | 2806 | + | 2.A.37.1.5 |
| STP | k141_224723 | k141_224723_4 | 3010 | 3696 | + | DeoRC |
| CAZyme | k141_224723 | k141_224723_5 | 3800 | 5479 | + | GH23 |
| pfam | k141_224723 | k141_224723_6 | 5672 | 6481 | + | adh_short | adh_short_C2 |
| TC | k141_224723 | k141_224723_7 | 6776 | 8152 | + | 1.I.1.1.3 |
Gene ID: k141_224723_3
Type: TC
Location: 1013 - 2806 (+)
Type: TC
Location: 1013 - 2806 (+)
Gene ID: k141_224723_4
Type: STP
Location: 3010 - 3696 (+)
Type: STP
Location: 3010 - 3696 (+)
Gene ID: k141_224723_5
Type: CAZyme
Location: 3800 - 5479 (+)
Type: CAZyme
Location: 3800 - 5479 (+)
Gene ID: k141_224723_6
Type: pfam
Location: 5672 - 6481 (+)
Type: pfam
Location: 5672 - 6481 (+)
Gene ID: k141_224723_7
Type: TC
Location: 6776 - 8152 (+)
Type: TC
Location: 6776 - 8152 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.