Cluster: CGMR011407_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011407
- CGC Family ID: CGCFAM_08225
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_148369 | k141_148369_78 | 90362 | 91654 | + | GT30 |
| STP | k141_148369 | k141_148369_79 | 91659 | 92366 | - | HATPase_c |
| pfam | k141_148369 | k141_148369_80 | 92375 | 93004 | - | RNase_T |
| TC | k141_148369 | k141_148369_81 | 93022 | 94275 | + | 9.B.1.1.3 |
Gene ID: k141_148369_78
Type: CAZyme
Location: 90362 - 91654 (+)
Type: CAZyme
Location: 90362 - 91654 (+)
Gene ID: k141_148369_79
Type: STP
Location: 91659 - 92366 (-)
Type: STP
Location: 91659 - 92366 (-)
Gene ID: k141_148369_80
Type: pfam
Location: 92375 - 93004 (-)
Type: pfam
Location: 92375 - 93004 (-)
Gene ID: k141_148369_81
Type: TC
Location: 93022 - 94275 (+)
Type: TC
Location: 93022 - 94275 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.