Cluster: CGMR011407_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011407
- CGC Family ID: CGCFAM_00291
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_148369 | k141_148369_58 | 65728 | 68490 | - | 3.A.5.1.1 |
| pfam | k141_148369 | k141_148369_59 | 68797 | 69225 | + | DciA |
| CAZyme | k141_148369 | k141_148369_60 | 69251 | 70186 | - | CE11 |
Gene ID: k141_148369_58
Type: TC
Location: 65728 - 68490 (-)
Type: TC
Location: 65728 - 68490 (-)
Gene ID: k141_148369_59
Type: pfam
Location: 68797 - 69225 (+)
Type: pfam
Location: 68797 - 69225 (+)
Gene ID: k141_148369_60
Type: CAZyme
Location: 69251 - 70186 (-)
Type: CAZyme
Location: 69251 - 70186 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.