Cluster: CGMR011407_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR011407
- CGC Family ID: CGCFAM_05389
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_148369 | k141_148369_2 | 1902 | 2795 | + | GH23 |
| TC | k141_148369 | k141_148369_3 | 2802 | 4832 | - | 3.A.11.3.1 |
| pfam | k141_148369 | k141_148369_4 | 5140 | 5406 | - | DUF4404 |
| pfam | k141_148369 | k141_148369_5 | 5555 | 5992 | + | Usp |
| CAZyme | k141_148369 | k141_148369_6 | 6017 | 7180 | - | GH102 |
Gene ID: k141_148369_2
Type: CAZyme
Location: 1902 - 2795 (+)
Type: CAZyme
Location: 1902 - 2795 (+)
Gene ID: k141_148369_3
Type: TC
Location: 2802 - 4832 (-)
Type: TC
Location: 2802 - 4832 (-)
Gene ID: k141_148369_4
Type: pfam
Location: 5140 - 5406 (-)
Type: pfam
Location: 5140 - 5406 (-)
Gene ID: k141_148369_5
Type: pfam
Location: 5555 - 5992 (+)
Type: pfam
Location: 5555 - 5992 (+)
Gene ID: k141_148369_6
Type: CAZyme
Location: 6017 - 7180 (-)
Type: CAZyme
Location: 6017 - 7180 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.