Cluster: CGMR011407_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR011407
- CGC Family ID: CGCFAM_00065
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_209331 | k141_209331_41 | 43090 | 44898 | - | 3.A.1.106.1 |
| CAZyme | k141_209331 | k141_209331_42 | 45238 | 46353 | + | GT4 |
| CAZyme | k141_209331 | k141_209331_43 | 46350 | 47246 | + | GT73 |
| CAZyme | k141_209331 | k141_209331_44 | 47297 | 48475 | + | GT4 |
| CAZyme | k141_209331 | k141_209331_45 | 48627 | 49493 | + | GT2 |
Gene ID: k141_209331_41
Type: TC
Location: 43090 - 44898 (-)
Type: TC
Location: 43090 - 44898 (-)
Gene ID: k141_209331_42
Type: CAZyme
Location: 45238 - 46353 (+)
Type: CAZyme
Location: 45238 - 46353 (+)
Gene ID: k141_209331_43
Type: CAZyme
Location: 46350 - 47246 (+)
Type: CAZyme
Location: 46350 - 47246 (+)
Gene ID: k141_209331_44
Type: CAZyme
Location: 47297 - 48475 (+)
Type: CAZyme
Location: 47297 - 48475 (+)
Gene ID: k141_209331_45
Type: CAZyme
Location: 48627 - 49493 (+)
Type: CAZyme
Location: 48627 - 49493 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oxalobacter
Species
Oxalobacter formigenes_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.