Cluster: CGMR011257_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011257
- CGC Family ID: CGCFAM_00932
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_60310 | k141_60310_3 | 2756 | 3517 | - | 3.A.16.1.3 |
| TF | k141_60310 | k141_60310_4 | 3713 | 4726 | + | LacI |
| STP | k141_60310 | k141_60310_5 | 4765 | 5763 | + | Peripla_BP_1 |
| TC | k141_60310 | k141_60310_6 | 5853 | 7325 | + | 3.A.1.2.6 |
| TC | k141_60310 | k141_60310_7 | 7322 | 8284 | + | 3.A.1.2.13 |
| pfam | k141_60310 | k141_60310_8 | 8311 | 9237 | + | AP_endonuc_2 |
| CAZyme | k141_60310 | k141_60310_9 | 9247 | 10284 | + | GH179 |
Gene ID: k141_60310_3
Type: TC
Location: 2756 - 3517 (-)
Type: TC
Location: 2756 - 3517 (-)
Gene ID: k141_60310_4
Type: TF
Location: 3713 - 4726 (+)
Type: TF
Location: 3713 - 4726 (+)
Gene ID: k141_60310_5
Type: STP
Location: 4765 - 5763 (+)
Type: STP
Location: 4765 - 5763 (+)
Gene ID: k141_60310_6
Type: TC
Location: 5853 - 7325 (+)
Type: TC
Location: 5853 - 7325 (+)
Gene ID: k141_60310_7
Type: TC
Location: 7322 - 8284 (+)
Type: TC
Location: 7322 - 8284 (+)
Gene ID: k141_60310_8
Type: pfam
Location: 8311 - 9237 (+)
Type: pfam
Location: 8311 - 9237 (+)
Gene ID: k141_60310_9
Type: CAZyme
Location: 9247 - 10284 (+)
Type: CAZyme
Location: 9247 - 10284 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.