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Cluster: CGMR011257_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5942 k141_5942_20 18363 19922 - 4.A.1.1.13
CAZyme k141_5942 k141_5942_21 19942 21285 - GH4
TC k141_5942 k141_5942_22 21489 22256 - 3.A.1.24.5
TC k141_5942 k141_5942_23 22291 23073 - 3.A.1.24.5
TC k141_5942 k141_5942_24 23105 23752 - 3.A.1.24.5
TC k141_5942 k141_5942_25 23742 24749 - 3.A.1.24.2
pfam k141_5942 k141_5942_26 25054 26343 + NTP_transf_3 | YqeC
STP k141_5942 k141_5942_27 26528 27643 - Fer4
TC k141_5942 k141_5942_28 27627 28970 - 2.A.66.1.33
TF k141_5942 k141_5942_29 29133 29987 + HTH_6
TC k141_5942 k141_5942_30 30081 31838 - 3.D.1.7.1
TC k141_5942 k141_5942_31 31865 33130 - 3.D.1.5.1
Gene ID: k141_5942_20
Type: TC
Location: 18363 - 19922 (-)
Gene ID: k141_5942_21
Type: CAZyme
Location: 19942 - 21285 (-)
Gene ID: k141_5942_22
Type: TC
Location: 21489 - 22256 (-)
Gene ID: k141_5942_23
Type: TC
Location: 22291 - 23073 (-)
Gene ID: k141_5942_24
Type: TC
Location: 23105 - 23752 (-)
Gene ID: k141_5942_25
Type: TC
Location: 23742 - 24749 (-)
Gene ID: k141_5942_26
Type: pfam
Location: 25054 - 26343 (+)
Gene ID: k141_5942_27
Type: STP
Location: 26528 - 27643 (-)
Gene ID: k141_5942_28
Type: TC
Location: 27627 - 28970 (-)
Gene ID: k141_5942_29
Type: TF
Location: 29133 - 29987 (+)
Gene ID: k141_5942_30
Type: TC
Location: 30081 - 31838 (-)
Gene ID: k141_5942_31
Type: TC
Location: 31865 - 33130 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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