Cluster: CGMR011257_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR011257
- CGC Family ID: CGCFAM_08221
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_66584 | k141_66584_6 | 3487 | 4560 | + | GT19 |
| TC | k141_66584 | k141_66584_7 | 4557 | 6338 | + | 3.A.1.106.2 |
| pfam | k141_66584 | k141_66584_8 | 6372 | 7136 | + | RNase_PH | RNase_PH_C |
| sulfatase | k141_66584 | k141_66584_9 | 7142 | 7732 | + | S1_7 |
| TC | k141_66584 | k141_66584_10 | 8004 | 9026 | + | 3.A.1.20.1 |
| TC | k141_66584 | k141_66584_11 | 9157 | 10278 | + | 3.A.1.20.1 |
| TC | k141_66584 | k141_66584_12 | 10268 | 11923 | + | 3.A.1.20.1 |
| TC | k141_66584 | k141_66584_13 | 11985 | 13682 | + | 8.A.59.2.1 |
Gene ID: k141_66584_6
Type: CAZyme
Location: 3487 - 4560 (+)
Type: CAZyme
Location: 3487 - 4560 (+)
Gene ID: k141_66584_7
Type: TC
Location: 4557 - 6338 (+)
Type: TC
Location: 4557 - 6338 (+)
Gene ID: k141_66584_8
Type: pfam
Location: 6372 - 7136 (+)
Type: pfam
Location: 6372 - 7136 (+)
Gene ID: k141_66584_9
Type: sulfatase
Location: 7142 - 7732 (+)
Type: sulfatase
Location: 7142 - 7732 (+)
Gene ID: k141_66584_10
Type: TC
Location: 8004 - 9026 (+)
Type: TC
Location: 8004 - 9026 (+)
Gene ID: k141_66584_11
Type: TC
Location: 9157 - 10278 (+)
Type: TC
Location: 9157 - 10278 (+)
Gene ID: k141_66584_12
Type: TC
Location: 10268 - 11923 (+)
Type: TC
Location: 10268 - 11923 (+)
Gene ID: k141_66584_13
Type: TC
Location: 11985 - 13682 (+)
Type: TC
Location: 11985 - 13682 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.