Cluster: CGMR011257_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR011257
- CGC Family ID: CGCFAM_00005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16995 | k141_16995_5 | 5715 | 6971 | + | 9.B.18.1.3 |
| CAZyme | k141_16995 | k141_16995_6 | 6973 | 7758 | + | GT2 |
| CAZyme | k141_16995 | k141_16995_7 | 7755 | 8843 | + | GT4 |
| pfam | k141_16995 | k141_16995_8 | 8845 | 10044 | + | EpsG |
| CAZyme | k141_16995 | k141_16995_9 | 10065 | 11174 | + | GT4 |
| CAZyme | k141_16995 | k141_16995_10 | 11187 | 12176 | + | GT2 |
| CAZyme | k141_16995 | k141_16995_11 | 12192 | 12980 | + | GT32 |
Gene ID: k141_16995_5
Type: TC
Location: 5715 - 6971 (+)
Type: TC
Location: 5715 - 6971 (+)
Gene ID: k141_16995_6
Type: CAZyme
Location: 6973 - 7758 (+)
Type: CAZyme
Location: 6973 - 7758 (+)
Gene ID: k141_16995_7
Type: CAZyme
Location: 7755 - 8843 (+)
Type: CAZyme
Location: 7755 - 8843 (+)
Gene ID: k141_16995_8
Type: pfam
Location: 8845 - 10044 (+)
Type: pfam
Location: 8845 - 10044 (+)
Gene ID: k141_16995_9
Type: CAZyme
Location: 10065 - 11174 (+)
Type: CAZyme
Location: 10065 - 11174 (+)
Gene ID: k141_16995_10
Type: CAZyme
Location: 11187 - 12176 (+)
Type: CAZyme
Location: 11187 - 12176 (+)
Gene ID: k141_16995_11
Type: CAZyme
Location: 12192 - 12980 (+)
Type: CAZyme
Location: 12192 - 12980 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A ulcerans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.