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Cluster: CGMR010900_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_51911 k141_51911_195 315018 316610 - CBM91 | GH43_12
CAZyme k141_51911 k141_51911_196 316759 318963 - GH3
CAZyme k141_51911 k141_51911_197 319658 322018 - GH95
TF k141_51911 k141_51911_198 322167 326282 - HTH_AraC
CAZyme k141_51911 k141_51911_199 326493 329327 + GH31_4
TC k141_51911 k141_51911_200 329383 332502 + 1.B.14.6.1
TC k141_51911 k141_51911_201 332515 334158 + 8.A.46.1.3
NULL(UNKNOWN) k141_51911 k141_51911_202 334215 336026 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_51911 k141_51911_203 336114 337586 + GH5_4
CAZyme k141_51911 k141_51911_204 337722 340223 + GH2
pfam k141_51911 k141_51911_205 340319 341728 - DUF5009
pfam k141_51911 k141_51911_206 341741 343090 - GHL10 | GHL6 | DUF4985
CAZyme k141_51911 k141_51911_207 343098 344513 - CE20
CAZyme k141_51911 k141_51911_208 344529 346847 - GH20
Gene ID: k141_51911_195
Type: CAZyme
Location: 315018 - 316610 (-)
Gene ID: k141_51911_196
Type: CAZyme
Location: 316759 - 318963 (-)
Gene ID: k141_51911_197
Type: CAZyme
Location: 319658 - 322018 (-)
Gene ID: k141_51911_198
Type: TF
Location: 322167 - 326282 (-)
Gene ID: k141_51911_199
Type: CAZyme
Location: 326493 - 329327 (+)
Gene ID: k141_51911_200
Type: TC
Location: 329383 - 332502 (+)
Gene ID: k141_51911_201
Type: TC
Location: 332515 - 334158 (+)
Gene ID: k141_51911_202
Type:
Location: 334215 - 336026 (+)
Gene ID: k141_51911_203
Type: CAZyme
Location: 336114 - 337586 (+)
Gene ID: k141_51911_204
Type: CAZyme
Location: 337722 - 340223 (+)
Gene ID: k141_51911_205
Type: pfam
Location: 340319 - 341728 (-)
Gene ID: k141_51911_206
Type: pfam
Location: 341741 - 343090 (-)
Gene ID: k141_51911_207
Type: CAZyme
Location: 343098 - 344513 (-)
Gene ID: k141_51911_208
Type: CAZyme
Location: 344529 - 346847 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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