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Cluster: CGMR010900_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_78156 k141_78156_6 7999 8835 + 3.A.1.15.11
pfam k141_78156 k141_78156_7 8832 9341 - ThrE_2
pfam k141_78156 k141_78156_8 9357 10157 - ThrE
CAZyme k141_78156 k141_78156_9 10399 13077 + CBM20 | CBM20 | GH77
CAZyme k141_78156 k141_78156_10 13550 15394 + GH13_46
TF k141_78156 k141_78156_11 15432 16466 + LacI
TC k141_78156 k141_78156_12 16489 17826 + 2.A.2.6.3
CAZyme k141_78156 k141_78156_13 17848 19209 + GH13
Gene ID: k141_78156_6
Type: TC
Location: 7999 - 8835 (+)
Gene ID: k141_78156_7
Type: pfam
Location: 8832 - 9341 (-)
Gene ID: k141_78156_8
Type: pfam
Location: 9357 - 10157 (-)
Gene ID: k141_78156_9
Type: CAZyme
Location: 10399 - 13077 (+)
Gene ID: k141_78156_10
Type: CAZyme
Location: 13550 - 15394 (+)
Gene ID: k141_78156_11
Type: TF
Location: 15432 - 16466 (+)
Gene ID: k141_78156_12
Type: TC
Location: 16489 - 17826 (+)
Gene ID: k141_78156_13
Type: CAZyme
Location: 17848 - 19209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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