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Cluster: CGMR010900_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_54838 k141_54838_29 32402 33673 + 2.A.1.14.2
CAZyme k141_54838 k141_54838_30 33695 34873 + GH33
CAZyme k141_54838 k141_54838_31 34881 36227 + GH33
TC k141_54838 k141_54838_32 36324 39350 + 1.B.14.6.1
pfam k141_54838 k141_54838_33 39389 41125 + SusD_RagB | SusD-like_3
CAZyme k141_54838 k141_54838_34 41201 42850 + GH78
Gene ID: k141_54838_29
Type: TC
Location: 32402 - 33673 (+)
Gene ID: k141_54838_30
Type: CAZyme
Location: 33695 - 34873 (+)
Gene ID: k141_54838_31
Type: CAZyme
Location: 34881 - 36227 (+)
Gene ID: k141_54838_32
Type: TC
Location: 36324 - 39350 (+)
Gene ID: k141_54838_33
Type: pfam
Location: 39389 - 41125 (+)
Gene ID: k141_54838_34
Type: CAZyme
Location: 41201 - 42850 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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