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Cluster: CGMR010900_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_62362 k141_62362_31 38647 39435 + 1.A.16.2.1
pfam k141_62362 k141_62362_32 39503 40378 - Arginase
TC k141_62362 k141_62362_33 40467 41852 - 3.A.18.1.1
CAZyme k141_62362 k141_62362_34 41947 43983 - GH182
TF k141_62362 k141_62362_35 44408 48397 - HTH_AraC
CAZyme k141_62362 k141_62362_36 49826 51469 - GH43_3
pfam k141_62362 k141_62362_37 51739 52734 - BT_3987-like_N | BT_3044-like_C | DUF4973
pfam k141_62362 k141_62362_38 52754 54838 - SusD_RagB | SusD-like_3
TC k141_62362 k141_62362_39 54851 57904 - 1.B.14.6.1
pfam k141_62362 k141_62362_40 57951 59396 - TIG
CAZyme k141_62362 k141_62362_41 59844 61997 - GH92
CAZyme k141_62362 k141_62362_42 62083 64725 - CBM67 | GH78
CAZyme k141_62362 k141_62362_43 64800 66284 - GH125
CAZyme k141_62362 k141_62362_44 66322 67518 - GH76
CAZyme k141_62362 k141_62362_45 67541 68731 - GH76
pfam k141_62362 k141_62362_46 68797 69951 - SusE
pfam k141_62362 k141_62362_47 69997 71661 - SusD_RagB | SusD-like_3
TC k141_62362 k141_62362_48 71670 74798 - 1.B.14.6.1
Gene ID: k141_62362_31
Type: TC
Location: 38647 - 39435 (+)
Gene ID: k141_62362_32
Type: pfam
Location: 39503 - 40378 (-)
Gene ID: k141_62362_33
Type: TC
Location: 40467 - 41852 (-)
Gene ID: k141_62362_34
Type: CAZyme
Location: 41947 - 43983 (-)
Gene ID: k141_62362_35
Type: TF
Location: 44408 - 48397 (-)
Gene ID: k141_62362_36
Type: CAZyme
Location: 49826 - 51469 (-)
Gene ID: k141_62362_37
Type: pfam
Location: 51739 - 52734 (-)
Gene ID: k141_62362_38
Type: pfam
Location: 52754 - 54838 (-)
Gene ID: k141_62362_39
Type: TC
Location: 54851 - 57904 (-)
Gene ID: k141_62362_40
Type: pfam
Location: 57951 - 59396 (-)
Gene ID: k141_62362_41
Type: CAZyme
Location: 59844 - 61997 (-)
Gene ID: k141_62362_42
Type: CAZyme
Location: 62083 - 64725 (-)
Gene ID: k141_62362_43
Type: CAZyme
Location: 64800 - 66284 (-)
Gene ID: k141_62362_44
Type: CAZyme
Location: 66322 - 67518 (-)
Gene ID: k141_62362_45
Type: CAZyme
Location: 67541 - 68731 (-)
Gene ID: k141_62362_46
Type: pfam
Location: 68797 - 69951 (-)
Gene ID: k141_62362_47
Type: pfam
Location: 69997 - 71661 (-)
Gene ID: k141_62362_48
Type: TC
Location: 71670 - 74798 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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