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Cluster: CGMR010900_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_63381 k141_63381_2 2068 5223 + 1.B.14.6.1
pfam k141_63381 k141_63381_3 5230 7005 + SusD_RagB | SusD-like_3
TC k141_63381 k141_63381_4 7024 10257 + 1.B.14.6.2
pfam k141_63381 k141_63381_5 10373 12166 + SusD_RagB | SusD-like_3
CAZyme k141_63381 k141_63381_6 12208 14097 + GH43_4
pfam k141_63381 k141_63381_7 14312 14866 + Hexapep | Hexapep_2
CAZyme k141_63381 k141_63381_8 14884 16818 + GH97
CAZyme k141_63381 k141_63381_9 16951 18924 + GH51_2
Gene ID: k141_63381_2
Type: TC
Location: 2068 - 5223 (+)
Gene ID: k141_63381_3
Type: pfam
Location: 5230 - 7005 (+)
Gene ID: k141_63381_4
Type: TC
Location: 7024 - 10257 (+)
Gene ID: k141_63381_5
Type: pfam
Location: 10373 - 12166 (+)
Gene ID: k141_63381_6
Type: CAZyme
Location: 12208 - 14097 (+)
Gene ID: k141_63381_7
Type: pfam
Location: 14312 - 14866 (+)
Gene ID: k141_63381_8
Type: CAZyme
Location: 14884 - 16818 (+)
Gene ID: k141_63381_9
Type: CAZyme
Location: 16951 - 18924 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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