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Cluster: CGMR010686_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_717237 k141_717237_6 4063 7170 - 2.A.6.2.15
TC k141_717237 k141_717237_7 7173 8330 - 2.A.6.2.22
STP k141_717237 k141_717237_8 8332 8943 - TetR_N
pfam k141_717237 k141_717237_9 9024 9659 - Hydrolase | HAD_2
CAZyme k141_717237 k141_717237_10 9665 11785 - GH77
CAZyme k141_717237 k141_717237_11 11798 13879 - GH13_11
CAZyme k141_717237 k141_717237_12 13888 16080 - CBM48 | GH13_9
pfam k141_717237 k141_717237_13 16302 16541 + DUF2934
STP k141_717237 k141_717237_14 16589 17722 - TPR_1
TC k141_717237 k141_717237_15 17787 19115 + 2.A.66.1.28
Gene ID: k141_717237_6
Type: TC
Location: 4063 - 7170 (-)
Gene ID: k141_717237_7
Type: TC
Location: 7173 - 8330 (-)
Gene ID: k141_717237_8
Type: STP
Location: 8332 - 8943 (-)
Gene ID: k141_717237_9
Type: pfam
Location: 9024 - 9659 (-)
Gene ID: k141_717237_10
Type: CAZyme
Location: 9665 - 11785 (-)
Gene ID: k141_717237_11
Type: CAZyme
Location: 11798 - 13879 (-)
Gene ID: k141_717237_12
Type: CAZyme
Location: 13888 - 16080 (-)
Gene ID: k141_717237_13
Type: pfam
Location: 16302 - 16541 (+)
Gene ID: k141_717237_14
Type: STP
Location: 16589 - 17722 (-)
Gene ID: k141_717237_15
Type: TC
Location: 17787 - 19115 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
CAG-239
→
Genus
CAZU01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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