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Cluster: CGMR010326_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_165070 k141_165070_39 41034 42239 + 9.A.28.1.1
CAZyme k141_165070 k141_165070_40 42445 43257 + GT2
pfam k141_165070 k141_165070_41 43393 44412 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd
CAZyme k141_165070 k141_165070_42 44425 45546 + GT4
CAZyme k141_165070 k141_165070_43 45728 48358 + GH73
pfam k141_165070 k141_165070_44 48493 49554 - LytR_cpsA_psr
pfam k141_165070 k141_165070_45 49738 50769 + NTP_transferase | NTP_transf_3
TC k141_165070 k141_165070_46 50988 52370 + 9.B.18.1.3
Gene ID: k141_165070_39
Type: TC
Location: 41034 - 42239 (+)
Gene ID: k141_165070_40
Type: CAZyme
Location: 42445 - 43257 (+)
Gene ID: k141_165070_41
Type: pfam
Location: 43393 - 44412 (+)
Gene ID: k141_165070_42
Type: CAZyme
Location: 44425 - 45546 (+)
Gene ID: k141_165070_43
Type: CAZyme
Location: 45728 - 48358 (+)
Gene ID: k141_165070_44
Type: pfam
Location: 48493 - 49554 (-)
Gene ID: k141_165070_45
Type: pfam
Location: 49738 - 50769 (+)
Gene ID: k141_165070_46
Type: TC
Location: 50988 - 52370 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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