Cluster: CGMR010326_CGC11
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR010326
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_85161 | k141_85161_3 | 1807 | 2736 | - | GT11 |
| CAZyme | k141_85161 | k141_85161_4 | 2749 | 3618 | - | GT6 |
| pfam | k141_85161 | k141_85161_5 | 3648 | 4238 | - | Hexapep | Hexapep_2 | Hexapep_2 |
| TC | k141_85161 | k141_85161_6 | 4249 | 5688 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | k141_85161 | k141_85161_7 | 5730 | 6815 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_85161 | k141_85161_8 | 6812 | 7750 | - | GT2 |
| NULL(UNKNOWN) | k141_85161 | k141_85161_9 | 8399 | 8740 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_85161 | k141_85161_10 | 8762 | 8857 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_85161 | k141_85161_11 | 8850 | 9959 | - | GT4 |
| CAZyme | k141_85161 | k141_85161_12 | 9978 | 10793 | - | GT2 |
| pfam | k141_85161 | k141_85161_13 | 10814 | 11650 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 |
| TC | k141_85161 | k141_85161_14 | 11647 | 12297 | - | 9.B.18.1.3 |
| STP | k141_85161 | k141_85161_15 | 12340 | 13071 | - | Aminotran_1_2 |
| TC | k141_85161 | k141_85161_16 | 13093 | 14907 | - | 9.B.18.2.1 |
Gene ID: k141_85161_3
Type: CAZyme
Location: 1807 - 2736 (-)
Type: CAZyme
Location: 1807 - 2736 (-)
Gene ID: k141_85161_4
Type: CAZyme
Location: 2749 - 3618 (-)
Type: CAZyme
Location: 2749 - 3618 (-)
Gene ID: k141_85161_5
Type: pfam
Location: 3648 - 4238 (-)
Type: pfam
Location: 3648 - 4238 (-)
Gene ID: k141_85161_6
Type: TC
Location: 4249 - 5688 (-)
Type: TC
Location: 4249 - 5688 (-)
Gene ID: k141_85161_7
Type:
Location: 5730 - 6815 (-)
Type:
Location: 5730 - 6815 (-)
Gene ID: k141_85161_8
Type: CAZyme
Location: 6812 - 7750 (-)
Type: CAZyme
Location: 6812 - 7750 (-)
Gene ID: k141_85161_9
Type:
Location: 8399 - 8740 (-)
Type:
Location: 8399 - 8740 (-)
Gene ID: k141_85161_10
Type:
Location: 8762 - 8857 (-)
Type:
Location: 8762 - 8857 (-)
Gene ID: k141_85161_11
Type: CAZyme
Location: 8850 - 9959 (-)
Type: CAZyme
Location: 8850 - 9959 (-)
Gene ID: k141_85161_12
Type: CAZyme
Location: 9978 - 10793 (-)
Type: CAZyme
Location: 9978 - 10793 (-)
Gene ID: k141_85161_13
Type: pfam
Location: 10814 - 11650 (-)
Type: pfam
Location: 10814 - 11650 (-)
Gene ID: k141_85161_14
Type: TC
Location: 11647 - 12297 (-)
Type: TC
Location: 11647 - 12297 (-)
Gene ID: k141_85161_15
Type: STP
Location: 12340 - 13071 (-)
Type: STP
Location: 12340 - 13071 (-)
Gene ID: k141_85161_16
Type: TC
Location: 13093 - 14907 (-)
Type: TC
Location: 13093 - 14907 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_X
Species
Clostridium_X cadaveris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.