Cluster: CGMR009652_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR009652
- CGC Family ID: CGCFAM_01594
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_87854 | k141_87854_10 | 6423 | 6848 | + | 9.A.24.1.7 |
| pfam | k141_87854 | k141_87854_11 | 6904 | 8451 | + | DUF975 | ABC_trans_CmpB |
| CAZyme | k141_87854 | k141_87854_12 | 8530 | 9741 | + | GT2 |
| STP | k141_87854 | k141_87854_13 | 9944 | 10672 | + | SBP_bac_3 |
| TC | k141_87854 | k141_87854_14 | 10683 | 11414 | + | 3.A.1.3.20 |
| TC | k141_87854 | k141_87854_15 | 11401 | 12126 | + | 3.A.1.3.25 |
| pfam | k141_87854 | k141_87854_16 | 12274 | 14601 | + | OTCace | ADI | OTCace_N |
| pfam | k141_87854 | k141_87854_17 | 14594 | 15529 | + | AA_kinase |
| TC | k141_87854 | k141_87854_18 | 15539 | 17011 | + | 2.A.118.1.1 |
| TC | k141_87854 | k141_87854_19 | 17220 | 19094 | + | 3.A.1.121.4 |
Gene ID: k141_87854_10
Type: TC
Location: 6423 - 6848 (+)
Type: TC
Location: 6423 - 6848 (+)
Gene ID: k141_87854_11
Type: pfam
Location: 6904 - 8451 (+)
Type: pfam
Location: 6904 - 8451 (+)
Gene ID: k141_87854_12
Type: CAZyme
Location: 8530 - 9741 (+)
Type: CAZyme
Location: 8530 - 9741 (+)
Gene ID: k141_87854_13
Type: STP
Location: 9944 - 10672 (+)
Type: STP
Location: 9944 - 10672 (+)
Gene ID: k141_87854_14
Type: TC
Location: 10683 - 11414 (+)
Type: TC
Location: 10683 - 11414 (+)
Gene ID: k141_87854_15
Type: TC
Location: 11401 - 12126 (+)
Type: TC
Location: 11401 - 12126 (+)
Gene ID: k141_87854_16
Type: pfam
Location: 12274 - 14601 (+)
Type: pfam
Location: 12274 - 14601 (+)
Gene ID: k141_87854_17
Type: pfam
Location: 14594 - 15529 (+)
Type: pfam
Location: 14594 - 15529 (+)
Gene ID: k141_87854_18
Type: TC
Location: 15539 - 17011 (+)
Type: TC
Location: 15539 - 17011 (+)
Gene ID: k141_87854_19
Type: TC
Location: 17220 - 19094 (+)
Type: TC
Location: 17220 - 19094 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
RF39
Family
UBA660
Genus
CAG-302
Species
CAG-302 sp934101345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_87854_12 | vegetarian > omnivore | 1.21842 | 0.04420 |
| k141_87854_12 | vegetarian > vegan | 2.74252 | 0.00732 |
| k141_87854_13 | vegetarian > omnivore | 2.71505 | 0.04420 |
| k141_87854_13 | vegetarian > vegan | 2.16740 | 0.00732 |
| k141_87854_14 | vegetarian > omnivore | 1.10443 | 0.04420 |
| k141_87854_14 | vegetarian > vegan | 1.85995 | 0.00732 |
| k141_87854_17 | vegetarian > vegan | 1.68538 | 0.00732 |