Cluster: CGMR009651_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR009651
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_3937 | k141_3937_16 | 12626 | 13555 | + | 2.A.69.4.3 |
| pfam | k141_3937 | k141_3937_17 | 13660 | 15339 | + | Polysacc_deac_1 |
| CAZyme | k141_3937 | k141_3937_18 | 15386 | 16135 | + | CE4 |
| TC | k141_3937 | k141_3937_19 | 16203 | 18098 | - | 3.A.1.120.6 |
| TF | k141_3937 | k141_3937_20 | 18346 | 18858 | + | MarR |
| TC | k141_3937 | k141_3937_21 | 18851 | 20587 | + | 3.A.1.135.6 |
| TC | k141_3937 | k141_3937_22 | 20600 | 22477 | + | 3.A.1.135.6 |
| TF | k141_3937 | k141_3937_23 | 22665 | 22865 | + | CSD |
| peptidase | k141_3937 | k141_3937_24 | 23055 | 24701 | + | M06.UPW |
| TC | k141_3937 | k141_3937_25 | 24886 | 25992 | + | 3.A.1.11.1 |
| TC | k141_3937 | k141_3937_26 | 25976 | 26839 | + | 3.A.1.11.1 |
| TC | k141_3937 | k141_3937_27 | 26852 | 27664 | + | 3.A.1.11.1 |
| TC | k141_3937 | k141_3937_28 | 27661 | 28761 | + | 3.A.1.11.7 |
Gene ID: k141_3937_16
Type: TC
Location: 12626 - 13555 (+)
Type: TC
Location: 12626 - 13555 (+)
Gene ID: k141_3937_17
Type: pfam
Location: 13660 - 15339 (+)
Type: pfam
Location: 13660 - 15339 (+)
Gene ID: k141_3937_18
Type: CAZyme
Location: 15386 - 16135 (+)
Type: CAZyme
Location: 15386 - 16135 (+)
Gene ID: k141_3937_19
Type: TC
Location: 16203 - 18098 (-)
Type: TC
Location: 16203 - 18098 (-)
Gene ID: k141_3937_20
Type: TF
Location: 18346 - 18858 (+)
Type: TF
Location: 18346 - 18858 (+)
Gene ID: k141_3937_21
Type: TC
Location: 18851 - 20587 (+)
Type: TC
Location: 18851 - 20587 (+)
Gene ID: k141_3937_22
Type: TC
Location: 20600 - 22477 (+)
Type: TC
Location: 20600 - 22477 (+)
Gene ID: k141_3937_23
Type: TF
Location: 22665 - 22865 (+)
Type: TF
Location: 22665 - 22865 (+)
Gene ID: k141_3937_24
Type: peptidase
Location: 23055 - 24701 (+)
Type: peptidase
Location: 23055 - 24701 (+)
Gene ID: k141_3937_25
Type: TC
Location: 24886 - 25992 (+)
Type: TC
Location: 24886 - 25992 (+)
Gene ID: k141_3937_26
Type: TC
Location: 25976 - 26839 (+)
Type: TC
Location: 25976 - 26839 (+)
Gene ID: k141_3937_27
Type: TC
Location: 26852 - 27664 (+)
Type: TC
Location: 26852 - 27664 (+)
Gene ID: k141_3937_28
Type: TC
Location: 27661 - 28761 (+)
Type: TC
Location: 27661 - 28761 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Bianqueaceae
Genus
Bianquea
Species
Bianquea renquensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.