Cluster: CGMR009651_CGC46
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR009651
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_168168 | k141_168168_2 | 279 | 3512 | - | GH106 |
| TF | k141_168168 | k141_168168_3 | 3514 | 5817 | - | HTH_AraC |
| pfam | k141_168168 | k141_168168_4 | 5944 | 7656 | - | SBP_bac_1 | SBP_bac_8 |
| TC | k141_168168 | k141_168168_5 | 7714 | 8640 | - | 3.A.1.1.10 |
| TC | k141_168168 | k141_168168_6 | 8662 | 9606 | - | 3.A.1.1.10 |
| CAZyme | k141_168168 | k141_168168_7 | 9970 | 11988 | - | PL12 |
| pfam | k141_168168 | k141_168168_8 | 12420 | 13301 | + | DegV |
| TC | k141_168168 | k141_168168_9 | 13382 | 15061 | - | 3.A.1.1.10 |
| TC | k141_168168 | k141_168168_10 | 15147 | 16103 | - | 3.A.1.1.10 |
| TC | k141_168168 | k141_168168_11 | 16117 | 17022 | - | 3.A.1.1.10 |
| pfam | k141_168168 | k141_168168_12 | 17015 | 17686 | - | Aldolase |
| CAZyme | k141_168168 | k141_168168_13 | 17676 | 18809 | - | GH33 |
| pfam | k141_168168 | k141_168168_14 | 18847 | 19791 | - | DGOK |
| TF | k141_168168 | k141_168168_15 | 19930 | 20736 | + | HTH_AraC |
| TC | k141_168168 | k141_168168_16 | 20935 | 23583 | - | 3.A.3.2.21 |
Gene ID: k141_168168_2
Type: CAZyme
Location: 279 - 3512 (-)
Type: CAZyme
Location: 279 - 3512 (-)
Gene ID: k141_168168_3
Type: TF
Location: 3514 - 5817 (-)
Type: TF
Location: 3514 - 5817 (-)
Gene ID: k141_168168_4
Type: pfam
Location: 5944 - 7656 (-)
Type: pfam
Location: 5944 - 7656 (-)
Gene ID: k141_168168_5
Type: TC
Location: 7714 - 8640 (-)
Type: TC
Location: 7714 - 8640 (-)
Gene ID: k141_168168_6
Type: TC
Location: 8662 - 9606 (-)
Type: TC
Location: 8662 - 9606 (-)
Gene ID: k141_168168_7
Type: CAZyme
Location: 9970 - 11988 (-)
Type: CAZyme
Location: 9970 - 11988 (-)
Gene ID: k141_168168_8
Type: pfam
Location: 12420 - 13301 (+)
Type: pfam
Location: 12420 - 13301 (+)
Gene ID: k141_168168_9
Type: TC
Location: 13382 - 15061 (-)
Type: TC
Location: 13382 - 15061 (-)
Gene ID: k141_168168_10
Type: TC
Location: 15147 - 16103 (-)
Type: TC
Location: 15147 - 16103 (-)
Gene ID: k141_168168_11
Type: TC
Location: 16117 - 17022 (-)
Type: TC
Location: 16117 - 17022 (-)
Gene ID: k141_168168_12
Type: pfam
Location: 17015 - 17686 (-)
Type: pfam
Location: 17015 - 17686 (-)
Gene ID: k141_168168_13
Type: CAZyme
Location: 17676 - 18809 (-)
Type: CAZyme
Location: 17676 - 18809 (-)
Gene ID: k141_168168_14
Type: pfam
Location: 18847 - 19791 (-)
Type: pfam
Location: 18847 - 19791 (-)
Gene ID: k141_168168_15
Type: TF
Location: 19930 - 20736 (+)
Type: TF
Location: 19930 - 20736 (+)
Gene ID: k141_168168_16
Type: TC
Location: 20935 - 23583 (-)
Type: TC
Location: 20935 - 23583 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Bianqueaceae
Genus
Bianquea
Species
Bianquea renquensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.