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Cluster: CGMR009651_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_111141 k141_111141_23 28081 30441 - GH2
pfam k141_111141 k141_111141_24 30549 31985 - PGI
TC k141_111141 k141_111141_25 32102 33256 + 2.A.86.1.11
pfam k141_111141 k141_111141_26 33528 34478 + Ldh_1_N | Ldh_1_C
NULL(UNKNOWN) k141_111141 k141_111141_27 34708 35406 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_111141 k141_111141_28 35476 37302 - 3.A.1.111.2
TC k141_111141 k141_111141_29 37345 39147 - 3.A.1.111.2
Gene ID: k141_111141_23
Type: CAZyme
Location: 28081 - 30441 (-)
Gene ID: k141_111141_24
Type: pfam
Location: 30549 - 31985 (-)
Gene ID: k141_111141_25
Type: TC
Location: 32102 - 33256 (+)
Gene ID: k141_111141_26
Type: pfam
Location: 33528 - 34478 (+)
Gene ID: k141_111141_27
Type:
Location: 34708 - 35406 (-)
Gene ID: k141_111141_28
Type: TC
Location: 35476 - 37302 (-)
Gene ID: k141_111141_29
Type: TC
Location: 37345 - 39147 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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