Cluster: CGMR009577_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate: alpha-glucan
- Genome ID: CGMR009577
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_23563 | k141_23563_2 | 525 | 1121 | + | 3.A.1.17.12 |
| pfam | k141_23563 | k141_23563_3 | 1229 | 1699 | + | TspO_MBR |
| CAZyme | k141_23563 | k141_23563_4 | 1899 | 3857 | + | CBM48 | GH13_9 |
| pfam | k141_23563 | k141_23563_5 | 3919 | 5106 | + | NTP_transferase | Hexapep_GlmU |
| pfam | k141_23563 | k141_23563_6 | 5108 | 6241 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_23563 | k141_23563_7 | 6741 | 8168 | + | GT5 |
| CAZyme | k141_23563 | k141_23563_8 | 8210 | 10639 | + | GT35 |
| CAZyme | k141_23563 | k141_23563_9 | 10643 | 12571 | + | GH13_39 |
| NULL(UNKNOWN) | k141_23563 | k141_23563_10 | 12568 | 12924 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_23563 | k141_23563_11 | 12928 | 15147 | + | GH31 |
| NULL(UNKNOWN) | k141_23563 | k141_23563_12 | 15180 | 15851 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_23563 | k141_23563_13 | 15856 | 17172 | + | GH29 |
Gene ID: k141_23563_2
Type: TC
Location: 525 - 1121 (+)
Type: TC
Location: 525 - 1121 (+)
Gene ID: k141_23563_3
Type: pfam
Location: 1229 - 1699 (+)
Type: pfam
Location: 1229 - 1699 (+)
Gene ID: k141_23563_4
Type: CAZyme
Location: 1899 - 3857 (+)
Type: CAZyme
Location: 1899 - 3857 (+)
Gene ID: k141_23563_5
Type: pfam
Location: 3919 - 5106 (+)
Type: pfam
Location: 3919 - 5106 (+)
Gene ID: k141_23563_6
Type: pfam
Location: 5108 - 6241 (+)
Type: pfam
Location: 5108 - 6241 (+)
Gene ID: k141_23563_7
Type: CAZyme
Location: 6741 - 8168 (+)
Type: CAZyme
Location: 6741 - 8168 (+)
Gene ID: k141_23563_8
Type: CAZyme
Location: 8210 - 10639 (+)
Type: CAZyme
Location: 8210 - 10639 (+)
Gene ID: k141_23563_9
Type: CAZyme
Location: 10643 - 12571 (+)
Type: CAZyme
Location: 10643 - 12571 (+)
Gene ID: k141_23563_10
Type:
Location: 12568 - 12924 (+)
Type:
Location: 12568 - 12924 (+)
Gene ID: k141_23563_11
Type: CAZyme
Location: 12928 - 15147 (+)
Type: CAZyme
Location: 12928 - 15147 (+)
Gene ID: k141_23563_12
Type:
Location: 15180 - 15851 (+)
Type:
Location: 15180 - 15851 (+)
Gene ID: k141_23563_13
Type: CAZyme
Location: 15856 - 17172 (+)
Type: CAZyme
Location: 15856 - 17172 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
QALR01
Species
QALR01 sp944381075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_23563_12 | vegetarian > vegan | 3.65580 | 0.00565 |
| k141_23563_13 | vegetarian > vegan | 4.52925 | 0.00565 |