Cluster: CGMR009315_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR009315
- CGC Family ID: CGCFAM_01722
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_191461 | k141_191461_13 | 9813 | 12029 | - | 1.B.33.1.1 |
| pfam | k141_191461 | k141_191461_14 | 12113 | 12940 | + | PDH_N | NAD_binding_2 | F420_oxidored | PDH_C |
| STP | k141_191461 | k141_191461_15 | 13007 | 14377 | + | Peptidase_M23 |
| CAZyme | k141_191461 | k141_191461_16 | 14374 | 15258 | + | CE11 |
Gene ID: k141_191461_13
Type: TC
Location: 9813 - 12029 (-)
Type: TC
Location: 9813 - 12029 (-)
Gene ID: k141_191461_14
Type: pfam
Location: 12113 - 12940 (+)
Type: pfam
Location: 12113 - 12940 (+)
Gene ID: k141_191461_15
Type: STP
Location: 13007 - 14377 (+)
Type: STP
Location: 13007 - 14377 (+)
Gene ID: k141_191461_16
Type: CAZyme
Location: 14374 - 15258 (+)
Type: CAZyme
Location: 14374 - 15258 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_D
Species
Campylobacter_D upsaliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.