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Cluster: CGMR009315_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_77159 k141_77159_61 56251 56853 - 9.B.18.1.2
CAZyme k141_77159 k141_77159_62 56838 57977 - GT4
CAZyme k141_77159 k141_77159_63 57974 60331 - GT66
CAZyme k141_77159 k141_77159_64 60328 61431 - GT4
CAZyme k141_77159 k141_77159_65 61419 62339 - GT2
CAZyme k141_77159 k141_77159_66 62336 63400 - GT4
TC k141_77159 k141_77159_67 63397 65097 - 3.A.1.106.15
pfam k141_77159 k141_77159_68 65091 66077 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
pfam k141_77159 k141_77159_69 66123 66902 - DNA_pol_B_exo1 | DNA_pol_B_exo2 | RNase_H_2
CAZyme k141_77159 k141_77159_70 66968 67990 + GT9
Gene ID: k141_77159_61
Type: TC
Location: 56251 - 56853 (-)
Gene ID: k141_77159_62
Type: CAZyme
Location: 56838 - 57977 (-)
Gene ID: k141_77159_63
Type: CAZyme
Location: 57974 - 60331 (-)
Gene ID: k141_77159_64
Type: CAZyme
Location: 60328 - 61431 (-)
Gene ID: k141_77159_65
Type: CAZyme
Location: 61419 - 62339 (-)
Gene ID: k141_77159_66
Type: CAZyme
Location: 62336 - 63400 (-)
Gene ID: k141_77159_67
Type: TC
Location: 63397 - 65097 (-)
Gene ID: k141_77159_68
Type: pfam
Location: 65091 - 66077 (-)
Gene ID: k141_77159_69
Type: pfam
Location: 66123 - 66902 (-)
Gene ID: k141_77159_70
Type: CAZyme
Location: 66968 - 67990 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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