Cluster: CGMR008527_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_08192
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_53401 | k141_53401_49 | 44478 | 45035 | + | 3.A.1.25.5 |
| TC | k141_53401 | k141_53401_50 | 45152 | 46525 | + | 2.A.66.1.32 |
| TF | k141_53401 | k141_53401_51 | 46546 | 47262 | + | LytTR |
| pfam | k141_53401 | k141_53401_52 | 47272 | 48582 | + | HATPase_c_5 |
| CAZyme | k141_53401 | k141_53401_53 | 48718 | 51759 | + | GH3 |
| TC | k141_53401 | k141_53401_54 | 51876 | 53714 | + | 1.B.52.2.1 |
Gene ID: k141_53401_49
Type: TC
Location: 44478 - 45035 (+)
Type: TC
Location: 44478 - 45035 (+)
Gene ID: k141_53401_50
Type: TC
Location: 45152 - 46525 (+)
Type: TC
Location: 45152 - 46525 (+)
Gene ID: k141_53401_51
Type: TF
Location: 46546 - 47262 (+)
Type: TF
Location: 46546 - 47262 (+)
Gene ID: k141_53401_52
Type: pfam
Location: 47272 - 48582 (+)
Type: pfam
Location: 47272 - 48582 (+)
Gene ID: k141_53401_53
Type: CAZyme
Location: 48718 - 51759 (+)
Type: CAZyme
Location: 48718 - 51759 (+)
Gene ID: k141_53401_54
Type: TC
Location: 51876 - 53714 (+)
Type: TC
Location: 51876 - 53714 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.