Cluster: CGMR008527_CGC45
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_02555
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_62005 | k141_62005_26 | 33219 | 35486 | + | GH2 |
| TC | k141_62005 | k141_62005_27 | 35516 | 36916 | + | 2.A.2.3.5 |
| TC | k141_62005 | k141_62005_28 | 37085 | 38644 | + | 1.B.52.2.2 |
Gene ID: k141_62005_26
Type: CAZyme
Location: 33219 - 35486 (+)
Type: CAZyme
Location: 33219 - 35486 (+)
Gene ID: k141_62005_27
Type: TC
Location: 35516 - 36916 (+)
Type: TC
Location: 35516 - 36916 (+)
Gene ID: k141_62005_28
Type: TC
Location: 37085 - 38644 (+)
Type: TC
Location: 37085 - 38644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_62005_26 | vegetarian > vegan | 1.35611 | 0.01057 |
| k141_62005_27 | vegetarian > vegan | 1.59776 | 0.01057 |