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Cluster: CGMR008527_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_62005 k141_62005_2 1377 3848 + GH3
NULL(UNKNOWN) k141_62005 k141_62005_3 3902 4804 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_62005 k141_62005_4 4823 6016 - HTH_AraC
CAZyme k141_62005 k141_62005_5 6133 7458 + GH1
TC k141_62005 k141_62005_6 7470 9161 + 2.A.2.3.3
CAZyme k141_62005 k141_62005_7 9165 11501 + GH2
CAZyme k141_62005 k141_62005_8 11503 13959 + GH3
Gene ID: k141_62005_2
Type: CAZyme
Location: 1377 - 3848 (+)
Gene ID: k141_62005_3
Type:
Location: 3902 - 4804 (+)
Gene ID: k141_62005_4
Type: TF
Location: 4823 - 6016 (-)
Gene ID: k141_62005_5
Type: CAZyme
Location: 6133 - 7458 (+)
Gene ID: k141_62005_6
Type: TC
Location: 7470 - 9161 (+)
Gene ID: k141_62005_7
Type: CAZyme
Location: 9165 - 11501 (+)
Gene ID: k141_62005_8
Type: CAZyme
Location: 11503 - 13959 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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