Cluster: CGMR008527_CGC40
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_00841
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_112904 | k141_112904_169 | 174903 | 177347 | + | GH2 |
| pfam | k141_112904 | k141_112904_170 | 177349 | 178818 | + | DUF6937 | DUF6938 |
| TC | k141_112904 | k141_112904_171 | 178849 | 180252 | + | 2.A.2.1.1 |
| CAZyme | k141_112904 | k141_112904_172 | 180355 | 182688 | + | GH36 |
| TC | k141_112904 | k141_112904_173 | 183167 | 184447 | - | 2.A.49.9.2 |
| pfam | k141_112904 | k141_112904_174 | 184574 | 185503 | + | DAGK_cat | YegS_C |
| TC | k141_112904 | k141_112904_175 | 185578 | 186681 | + | 9.B.34.1.2 |
Gene ID: k141_112904_169
Type: CAZyme
Location: 174903 - 177347 (+)
Type: CAZyme
Location: 174903 - 177347 (+)
Gene ID: k141_112904_170
Type: pfam
Location: 177349 - 178818 (+)
Type: pfam
Location: 177349 - 178818 (+)
Gene ID: k141_112904_171
Type: TC
Location: 178849 - 180252 (+)
Type: TC
Location: 178849 - 180252 (+)
Gene ID: k141_112904_172
Type: CAZyme
Location: 180355 - 182688 (+)
Type: CAZyme
Location: 180355 - 182688 (+)
Gene ID: k141_112904_173
Type: TC
Location: 183167 - 184447 (-)
Type: TC
Location: 183167 - 184447 (-)
Gene ID: k141_112904_174
Type: pfam
Location: 184574 - 185503 (+)
Type: pfam
Location: 184574 - 185503 (+)
Gene ID: k141_112904_175
Type: TC
Location: 185578 - 186681 (+)
Type: TC
Location: 185578 - 186681 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.