Cluster: CGMR008527_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_00010
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_16915 | k141_16915_25 | 22382 | 24640 | - | GT35 |
| TF | k141_16915 | k141_16915_26 | 24776 | 25663 | + | HTH_AraC | HTH_AraC |
| TF | k141_16915 | k141_16915_27 | 25829 | 26839 | + | LacI |
| TC | k141_16915 | k141_16915_28 | 26954 | 28261 | + | 3.A.1.1.45 |
| TC | k141_16915 | k141_16915_29 | 28420 | 29271 | + | 3.A.1.1.45 |
| TC | k141_16915 | k141_16915_30 | 29271 | 30113 | + | 3.A.1.1.45 |
| CAZyme | k141_16915 | k141_16915_31 | 30149 | 31633 | + | GH77 |
Gene ID: k141_16915_25
Type: CAZyme
Location: 22382 - 24640 (-)
Type: CAZyme
Location: 22382 - 24640 (-)
Gene ID: k141_16915_26
Type: TF
Location: 24776 - 25663 (+)
Type: TF
Location: 24776 - 25663 (+)
Gene ID: k141_16915_27
Type: TF
Location: 25829 - 26839 (+)
Type: TF
Location: 25829 - 26839 (+)
Gene ID: k141_16915_28
Type: TC
Location: 26954 - 28261 (+)
Type: TC
Location: 26954 - 28261 (+)
Gene ID: k141_16915_29
Type: TC
Location: 28420 - 29271 (+)
Type: TC
Location: 28420 - 29271 (+)
Gene ID: k141_16915_30
Type: TC
Location: 29271 - 30113 (+)
Type: TC
Location: 29271 - 30113 (+)
Gene ID: k141_16915_31
Type: CAZyme
Location: 30149 - 31633 (+)
Type: CAZyme
Location: 30149 - 31633 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.