Cluster: CGMR008527_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_03717
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12122 | k141_12122_53 | 58148 | 59521 | + | 2.A.22.5.3 |
| pfam | k141_12122 | k141_12122_54 | 59514 | 59882 | - | YgbA_NO |
| TC | k141_12122 | k141_12122_55 | 59892 | 61550 | - | 3.A.1.106.12 |
| TC | k141_12122 | k141_12122_56 | 61547 | 63313 | - | 3.A.1.106.12 |
| CAZyme | k141_12122 | k141_12122_57 | 63557 | 65482 | - | GH2 |
| TC | k141_12122 | k141_12122_58 | 65604 | 67481 | - | 3.A.3.6.10 |
Gene ID: k141_12122_53
Type: TC
Location: 58148 - 59521 (+)
Type: TC
Location: 58148 - 59521 (+)
Gene ID: k141_12122_54
Type: pfam
Location: 59514 - 59882 (-)
Type: pfam
Location: 59514 - 59882 (-)
Gene ID: k141_12122_55
Type: TC
Location: 59892 - 61550 (-)
Type: TC
Location: 59892 - 61550 (-)
Gene ID: k141_12122_56
Type: TC
Location: 61547 - 63313 (-)
Type: TC
Location: 61547 - 63313 (-)
Gene ID: k141_12122_57
Type: CAZyme
Location: 63557 - 65482 (-)
Type: CAZyme
Location: 63557 - 65482 (-)
Gene ID: k141_12122_58
Type: TC
Location: 65604 - 67481 (-)
Type: TC
Location: 65604 - 67481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.