Cluster: CGMR008527_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_01886
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_16915 | k141_16915_15 | 11070 | 14192 | + | GH3 |
| CAZyme | k141_16915 | k141_16915_16 | 14237 | 15301 | - | GT28 |
| NULL(UNKNOWN) | k141_16915 | k141_16915_17 | 15450 | 15776 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_16915 | k141_16915_18 | 15925 | 17061 | + | Hydrolase_2 | SH3_3 | SH3_3 |
| TC | k141_16915 | k141_16915_19 | 17396 | 18313 | + | 8.A.21.2.2 |
Gene ID: k141_16915_15
Type: CAZyme
Location: 11070 - 14192 (+)
Type: CAZyme
Location: 11070 - 14192 (+)
Gene ID: k141_16915_16
Type: CAZyme
Location: 14237 - 15301 (-)
Type: CAZyme
Location: 14237 - 15301 (-)
Gene ID: k141_16915_17
Type:
Location: 15450 - 15776 (+)
Type:
Location: 15450 - 15776 (+)
Gene ID: k141_16915_18
Type: pfam
Location: 15925 - 17061 (+)
Type: pfam
Location: 15925 - 17061 (+)
Gene ID: k141_16915_19
Type: TC
Location: 17396 - 18313 (+)
Type: TC
Location: 17396 - 18313 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.