Cluster: CGMR008527_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_00064
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_70390 | k141_70390_73 | 80726 | 82921 | + | GT2 | GT2 |
| NULL(UNKNOWN) | k141_70390 | k141_70390_74 | 82937 | 83749 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_70390 | k141_70390_75 | 83797 | 87927 | + | RgpF |
| TC | k141_70390 | k141_70390_76 | 87946 | 88785 | + | 3.A.1.104.1 |
| TC | k141_70390 | k141_70390_77 | 88806 | 90134 | + | 3.A.1.103.6 |
| CAZyme | k141_70390 | k141_70390_78 | 90137 | 92209 | + | GH25 |
Gene ID: k141_70390_73
Type: CAZyme
Location: 80726 - 82921 (+)
Type: CAZyme
Location: 80726 - 82921 (+)
Gene ID: k141_70390_74
Type:
Location: 82937 - 83749 (+)
Type:
Location: 82937 - 83749 (+)
Gene ID: k141_70390_75
Type: pfam
Location: 83797 - 87927 (+)
Type: pfam
Location: 83797 - 87927 (+)
Gene ID: k141_70390_76
Type: TC
Location: 87946 - 88785 (+)
Type: TC
Location: 87946 - 88785 (+)
Gene ID: k141_70390_77
Type: TC
Location: 88806 - 90134 (+)
Type: TC
Location: 88806 - 90134 (+)
Gene ID: k141_70390_78
Type: CAZyme
Location: 90137 - 92209 (+)
Type: CAZyme
Location: 90137 - 92209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.