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Cluster: CGMR008527_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_70390 k141_70390_59 63526 63792 + 8.A.8.1.6
pfam k141_70390 k141_70390_60 63845 65527 + HMGL-like | LeuA_dimer | IPMS_D2
pfam k141_70390 k141_70390_61 65546 66430 + Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_70390 k141_70390_62 66430 67266 + GT2
CAZyme k141_70390 k141_70390_63 67269 67961 + GT2
pfam k141_70390 k141_70390_64 67973 68344 + DUF2304
pfam k141_70390 k141_70390_65 68362 69447 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_70390 k141_70390_66 69440 70357 + GT2
pfam k141_70390 k141_70390_67 70387 72189 + DUF2142
CAZyme k141_70390 k141_70390_68 72232 73182 + GT2
CAZyme k141_70390 k141_70390_69 73170 75107 + GT2
Gene ID: k141_70390_59
Type: TC
Location: 63526 - 63792 (+)
Gene ID: k141_70390_60
Type: pfam
Location: 63845 - 65527 (+)
Gene ID: k141_70390_61
Type: pfam
Location: 65546 - 66430 (+)
Gene ID: k141_70390_62
Type: CAZyme
Location: 66430 - 67266 (+)
Gene ID: k141_70390_63
Type: CAZyme
Location: 67269 - 67961 (+)
Gene ID: k141_70390_64
Type: pfam
Location: 67973 - 68344 (+)
Gene ID: k141_70390_65
Type: pfam
Location: 68362 - 69447 (+)
Gene ID: k141_70390_66
Type: CAZyme
Location: 69440 - 70357 (+)
Gene ID: k141_70390_67
Type: pfam
Location: 70387 - 72189 (+)
Gene ID: k141_70390_68
Type: CAZyme
Location: 72232 - 73182 (+)
Gene ID: k141_70390_69
Type: CAZyme
Location: 73170 - 75107 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_70390_65 vegetarian > vegan 1.03816 0.01057

🧭 Explore Read Mapping of CGC

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