Cluster: CGMR008527_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_00206
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_68339 | k141_68339_7 | 4400 | 7216 | - | CBM67 | GH78 |
| CAZyme | k141_68339 | k141_68339_8 | 7229 | 9859 | - | GH3 |
| TF | k141_68339 | k141_68339_9 | 9962 | 11158 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_68339 | k141_68339_10 | 11167 | 13509 | - | GH2 |
| CAZyme | k141_68339 | k141_68339_11 | 13533 | 15020 | - | GH43_35 |
| TC | k141_68339 | k141_68339_12 | 15108 | 16439 | - | 2.A.2.3.7 |
Gene ID: k141_68339_7
Type: CAZyme
Location: 4400 - 7216 (-)
Type: CAZyme
Location: 4400 - 7216 (-)
Gene ID: k141_68339_8
Type: CAZyme
Location: 7229 - 9859 (-)
Type: CAZyme
Location: 7229 - 9859 (-)
Gene ID: k141_68339_9
Type: TF
Location: 9962 - 11158 (-)
Type: TF
Location: 9962 - 11158 (-)
Gene ID: k141_68339_10
Type: CAZyme
Location: 11167 - 13509 (-)
Type: CAZyme
Location: 11167 - 13509 (-)
Gene ID: k141_68339_11
Type: CAZyme
Location: 13533 - 15020 (-)
Type: CAZyme
Location: 13533 - 15020 (-)
Gene ID: k141_68339_12
Type: TC
Location: 15108 - 16439 (-)
Type: TC
Location: 15108 - 16439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.