Cluster: CGMR008527_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_00507
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_37128 | k141_37128_18 | 19206 | 22634 | + | GH3 |
| CAZyme | k141_37128 | k141_37128_19 | 22854 | 25250 | + | GH3 |
| pfam | k141_37128 | k141_37128_20 | 25262 | 25828 | + | GtrA_DPMS_TM |
| TC | k141_37128 | k141_37128_21 | 26008 | 27483 | + | 1.B.52.2.2 |
Gene ID: k141_37128_18
Type: CAZyme
Location: 19206 - 22634 (+)
Type: CAZyme
Location: 19206 - 22634 (+)
Gene ID: k141_37128_19
Type: CAZyme
Location: 22854 - 25250 (+)
Type: CAZyme
Location: 22854 - 25250 (+)
Gene ID: k141_37128_20
Type: pfam
Location: 25262 - 25828 (+)
Type: pfam
Location: 25262 - 25828 (+)
Gene ID: k141_37128_21
Type: TC
Location: 26008 - 27483 (+)
Type: TC
Location: 26008 - 27483 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.