Cluster: CGMR008527_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008527
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_88236 | k141_88236_300 | 292701 | 293570 | - | 3.A.1.149.1 |
| TF | k141_88236 | k141_88236_301 | 293571 | 293948 | - | GntR |
| pfam | k141_88236 | k141_88236_302 | 294161 | 295066 | - | TpcC |
| CAZyme | k141_88236 | k141_88236_303 | 295081 | 296085 | - | GH23 |
| NULL(UNKNOWN) | k141_88236 | k141_88236_304 | 296082 | 298232 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_88236 | k141_88236_305 | 298238 | 299251 | - | 3.A.7.14.2 |
Gene ID: k141_88236_300
Type: TC
Location: 292701 - 293570 (-)
Type: TC
Location: 292701 - 293570 (-)
Gene ID: k141_88236_301
Type: TF
Location: 293571 - 293948 (-)
Type: TF
Location: 293571 - 293948 (-)
Gene ID: k141_88236_302
Type: pfam
Location: 294161 - 295066 (-)
Type: pfam
Location: 294161 - 295066 (-)
Gene ID: k141_88236_303
Type: CAZyme
Location: 295081 - 296085 (-)
Type: CAZyme
Location: 295081 - 296085 (-)
Gene ID: k141_88236_304
Type:
Location: 296082 - 298232 (-)
Type:
Location: 296082 - 298232 (-)
Gene ID: k141_88236_305
Type: TC
Location: 298238 - 299251 (-)
Type: TC
Location: 298238 - 299251 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.