Cluster: CGMR008527_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_01058
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_88236 | k141_88236_71 | 65212 | 67911 | - | GH3 |
| TF | k141_88236 | k141_88236_72 | 68035 | 69249 | + | HTH_AraC |
| pfam | k141_88236 | k141_88236_73 | 69303 | 70511 | + | Iso_dh |
| TC | k141_88236 | k141_88236_74 | 70521 | 72464 | + | 3.A.1.121.4 |
Gene ID: k141_88236_71
Type: CAZyme
Location: 65212 - 67911 (-)
Type: CAZyme
Location: 65212 - 67911 (-)
Gene ID: k141_88236_72
Type: TF
Location: 68035 - 69249 (+)
Type: TF
Location: 68035 - 69249 (+)
Gene ID: k141_88236_73
Type: pfam
Location: 69303 - 70511 (+)
Type: pfam
Location: 69303 - 70511 (+)
Gene ID: k141_88236_74
Type: TC
Location: 70521 - 72464 (+)
Type: TC
Location: 70521 - 72464 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.